PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc046150.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 111aa    MW: 12076.4 Da    PI: 6.0872
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc046150.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45.1e-16342647
                           HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                            eE+ +++ a++ +G++ W++Iar ++ gRt++ +k++w++ 
  Cse_sc046150.1_g010.1  3 DEEERIILSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 42
                           59***************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MADEEERIIL SAHAIHGNKW AAIARLLPGR TDNAIKNHWN STLRRRGVGS GRFNIGSANS  60
NTLDEVATVS VDRSKASSEE TLLCGDVNSF KCVDGVDVTS DHYGPFMESV M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.14e-25MYB family protein