PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc046455.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 297aa    MW: 32972.2 Da    PI: 7.5517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc046455.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH376.2e-1285135255
                            HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +++h  +Er+RR+++N+ +  Lr+l+P     + k+ + a+i   +++YI +Lq
  Cse_sc046455.1_g010.1  85 KMNHVTVERNRRKQMNEHLTVLRSLMPCF---YIKRGDQASIIGGVIDYITELQ 135
                            5799************************9...9*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MVTESTSLTD LFDPNGSVAY PDDIFNILEA LEGISNEFMV SIPLADSSSG VQELVEVEHE  60
AFSPRNKRQK VSGDEGCENL DGQVKMNHVT VERNRRKQMN EHLTVLRSLM PCFYIKRGDQ  120
ASIIGGVIDY ITELQQVLQS XEAKKQRKVY SDHVLSPRLI SSPRTTLPLS PRKPPLSPRP  180
ISLPISPRTP QSASPYRHRL PSATSYLKTR PASPCNYSSS NDTINELVAN SKSSIADVEV  240
KFSGANLLLK TLSPRLPGQV TKIISVLEDL SLEILQAKIN IVDETMVNSF XIKVTYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.12e-45bHLH family protein