PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046546.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GeBP

Protein Properties

Length: 367aa MW: 41174.5 Da PI: 4.6581

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046546.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	106.4	2.2e-33	168	268	2	98
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk...aksgkepsfskehd 85 lfqrl+seeDe+v+L+ +id+k+++g d+++fye+v+k + +++s+ qlv+KirrLKkKf+++ + +k+gk++sfsk+++ Cse_sc046546.1_g010.1 168 LFQRLFSEEDELVILKSMIDYKNENGItGEITDMSGFYEIVRKLLRVDFSRAQLVDKIRRLKKKFNNNAVRelkKKKGKSISFSKSNE 255 79**********************966677*******************************988878789******** PP DUF573 86 qkifelskkiWgs 98 ++ +elsk iWgs Cse_sc046546.1_g010.1 256 REGYELSKLIWGS 268 *********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MAKNRQPDPL PPPSSSDEEE ENTGSEEEES GSESDEDSPP NPKQPQKTQT PTQSDDSGSD 60 DSDEDSPPNP KQPQKIQTQT QSDDSGSDDS DEDSQANIPT VIIKPISSKP MKNDNQSNPD 120 SKTAKKDEPE SKKAKKDEPD KKRKNSEEIE KESKKAKKTD EEDSKKPLFQ RLFSEEDELV 180 ILKSMIDYKN ENGITGEITD MSGFYEIVRK LLRVDFSRAQ LVDKIRRLKK KFNNNAVREL 240 KKKKGKSISF SKSNEREGYE LSKLIWGSGA SSSMPNGVDD NEVLMTDVDN GMNVNRFVKY 300 GGSNNGPVLV EEIIKAGMEL VDDSKRAEWE AKWKMLKLQE LELYAKRTNL VQEHVAVVIE 360 GVKSSAI

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MAKNRQPDPL PPPSSSDEEE ENTGSEEEES GSESDEDSPP NPKQPQKTQT PTQSDDSGSD  60
DSDEDSPPNP KQPQKIQTQT QSDDSGSDDS DEDSQANIPT VIIKPISSKP MKNDNQSNPD  120
SKTAKKDEPE SKKAKKDEPD KKRKNSEEIE KESKKAKKTD EEDSKKPLFQ RLFSEEDELV  180
ILKSMIDYKN ENGITGEITD MSGFYEIVRK LLRVDFSRAQ LVDKIRRLKK KFNNNAVREL  240
KKKKGKSISF SKSNEREGYE LSKLIWGSGA SSSMPNGVDD NEVLMTDVDN GMNVNRFVKY  300
GGSNNGPVLV EEIIKAGMEL VDDSKRAEWE AKWKMLKLQE LELYAKRTNL VQEHVAVVIE  360
GVKSSAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	244	KKKFNNNAVRELKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25210.1	4e-20	GeBP family protein