PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc046750.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 393aa MW: 45160.9 Da PI: 6.8704

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc046750.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159	1.9e-49	37	162	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d Cse_sc046750.1_g010.1 37 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGAD 123 79*************************.89***********8778899****************************** PP NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +++ + +glkktLvfy+g+apkg +t+W+m+eyrl Cse_sc046750.1_g010.1 124 RMIRTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 162 ***********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 393 aa Download sequence
MNQQEEEMSS SKVNNNNNNR QEDDDNGDDH HENDMVMPGF RFHPTEEELV EFYLRRKVEG 60 KRFNVELITF LDLYRYDPWE LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT 120 GADRMIRTEN FRSIGLKKTL VFYSGKAPKG IRTSWIMNEY RLPQHETERL QKAEISLCRV 180 YKRAGVEDHP SLPRTLPTTR ATSSRPSNTD KRQHSQNLLA FHSYEAQNSN QNDEKLSETS 240 GSSTTDIVGT ALGLSSPINP SYNNYITPFQ PINTTLTQPS SSNIGALTAS SSVFPNNVDD 300 LHRIISYQQA SVNNPASQAF HIQNYQPKFS NNLLLQPQPQ LQPQQLQQQS QHQQALLSLN 360 NLAGEGQVNF PDRLWDWNPM PSEGNKDYTN PFK

Sequence ? help Back to Top

Protein Sequence Length: 393 aa Download sequence

MNQQEEEMSS SKVNNNNNNR QEDDDNGDDH HENDMVMPGF RFHPTEEELV EFYLRRKVEG  60
KRFNVELITF LDLYRYDPWE LPALAAIGEK EWFFYVPRDR KYRNGDRPNR VTTSGYWKAT  120
GADRMIRTEN FRSIGLKKTL VFYSGKAPKG IRTSWIMNEY RLPQHETERL QKAEISLCRV  180
YKRAGVEDHP SLPRTLPTTR ATSSRPSNTD KRQHSQNLLA FHSYEAQNSN QNDEKLSETS  240
GSSTTDIVGT ALGLSSPINP SYNNYITPFQ PINTTLTQPS SSNIGALTAS SSVFPNNVDD  300
LHRIISYQQA SVNNPASQAF HIQNYQPKFS NNLLLQPQPQ LQPQQLQQQS QHQQALLSLN  360
NLAGEGQVNF PDRLWDWNPM PSEGNKDYTN PFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-111	NAC family protein