PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc046802.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 431aa    MW: 47512.4 Da    PI: 6.1895
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc046802.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.00034294313221
                            EETTTTEEESSHHHHHHHHH CS
                zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                            +C  Cg s+s++ +L +Hi 
  Cse_sc046802.1_g010.1 294 QCDLCGISCSSSQDLIKHIE 313
                            7*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MKEKQLDIPI LTPLLACYDV PAPIIYPPGV DPCSFLIKKP HCDQKMEIIS FMDIDPCVVS  60
RSVCVARTYD LSASEHAGVY LSEPLPVSTT SNSPAHSETT TQQHPDDGKS QDTLQKEALA  120
VVDSLFVCRI PDPGCDYQKI VTEDQMTTPM CMDPTSMTKT NGGAQNGYDK LFWCKICKIS  180
CSCEQDLEKH MSGKPHLKAL KLSEQIQAIQ ATQNSMDMTP VEMPLEDLKP IECETVNMDG  240
NNKPTRCEVC DISCTSTKDI KRHLTGKKHL KNLQKLGKLP ELPLTPSSLV NSTQCDLCGI  300
SCSSSQDLIK HIEGQKHKKI ARNLETLKRH SPAPAAAKTS LEDLMNEDME EGEIVTKDMS  360
KRKANGSLAS DDNVNTKRQK VTEEVVDSGE LVTCRLCDVA SNGIVAYQYH LSSSEHSTMV  420
MKKFNGGSSK Q