PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc046866.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 264aa    MW: 30137.9 Da    PI: 7.2895
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc046866.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476.1e-151461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g W+++Ed++l d+v  +G g+W+ ++   g+ R +k+c++rw +yl
  Cse_sc046866.1_g010.1 14 KGLWSPDEDQKLRDYVMNYGHGCWSMVPINAGLQRNGKSCRLRWINYL 61
                           678*******************************************97 PP
2Myb_DNA-binding47.93.1e-1567112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            +g+++ +E+e ++ ++  lG++ W++I+++++ gRt++++k++w++yl
  Cse_sc046866.1_g010.1  67 KGAFSMQEEETILTLHGVLGNK-WSLISHHLP-GRTDNEIKNHWHSYL 112
                            799*******************.*********.************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MRCKTEKSKM KPKKGLWSPD EDQKLRDYVM NYGHGCWSMV PINAGLQRNG KSCRLRWINY  60
LRPGLKKGAF SMQEEETILT LHGVLGNKWS LISHHLPGRT DNEIKNHWHS YLKKKVPKSE  120
NLETQPKPEC TNSTESSSYM NSITRNTSFD SLDATNGSSF IMEQPATQAQ VNKLPKILFA  180
DWLSLEEFHG HQSVVCKGEI SSGLEYHNAP VNGLLSNEGS SDSNETVNCL NKYSNEDMFH  240
TQMKFDQIFN FTGGDFNIED FLYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52260.14e-62MYB family protein