PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc047126.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 355aa MW: 40119.5 Da PI: 6.5184

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc047126.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.5	7.1e-29	86	135	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtpeLH rF++av++LGG+e+AtPk +l++m++kgL+++hvkSHLQ Cse_sc047126.1_g020.1 86 PRLRWTPELHLRFIHAVKKLGGQERATPKMVLQMMNIKGLSISHVKSHLQ 135 9************************************************* PP
2	Myb_DNA-binding	52.2	1.4e-16	87	136	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT+e+++++++avk+lGg t+k + ++m+ kg++ ++ks++q Cse_sc047126.1_g020.1 87 RLRWTPELHLRFIHAVKKLGGQeraTPKMVLQMMNiKGLSISHVKSHLQV 136 89**********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MKRIDSFDEQ DHAQIGNTAE KNPSFLGLEE EEEEEDGDEF EQVDHNSISA SRPKNVSTSS 60 DSTLESDKKA SSASGSVRPY VRSKNPRLRW TPELHLRFIH AVKKLGGQER ATPKMVLQMM 120 NIKGLSISHV KSHLQVIPFI NMYRSKKDPN QAVSEQGLLY ASDDHHIYNL SQLPMLQSFT 180 QKSISSFSLS DTLWSHHTNV DYNPCISGFN HGVYSSRTER LSFDKNNISS LKCLETHNTE 240 KSQLRLFGNV DRLSRDDQKD AKDKDRIINN QDKMSLKRKA VDEQDPKNLD LDLNLSLKTK 300 TREDDDTSDD EVNENALSLS LFSSISTNSP ANIRRSKNAK IMVGSSSSTN LDLTL

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MKRIDSFDEQ DHAQIGNTAE KNPSFLGLEE EEEEEDGDEF EQVDHNSISA SRPKNVSTSS  60
DSTLESDKKA SSASGSVRPY VRSKNPRLRW TPELHLRFIH AVKKLGGQER ATPKMVLQMM  120
NIKGLSISHV KSHLQVIPFI NMYRSKKDPN QAVSEQGLLY ASDDHHIYNL SQLPMLQSFT  180
QKSISSFSLS DTLWSHHTNV DYNPCISGFN HGVYSSRTER LSFDKNNISS LKCLETHNTE  240
KSQLRLFGNV DRLSRDDQKD AKDKDRIINN QDKMSLKRKA VDEQDPKNLD LDLNLSLKTK  300
TREDDDTSDD EVNENALSLS LFSSISTNSP ANIRRSKNAK IMVGSSSSTN LDLTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	7e-42	G2-like family protein