PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc047413.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 217aa    MW: 24280.2 Da    PI: 7.4636
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc047413.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.92.1e-171257147
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           +g+WT+eEd +l+++v+  G ++W+ I + ++ gR++k+c++rw + 
  Cse_sc047413.1_g010.1 12 KGSWTPEEDAKLIELVETQGARNWSVIGSSIP-GRSGKSCRLRWCNQ 57
                           799*****************************.***********985 PP
2Myb_DNA-binding49.59.5e-1665108247
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            +++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc047413.1_g010.1  65 LPFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 108
                            69*******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MTNDDVNLFK KKGSWTPEED AKLIELVETQ GARNWSVIGS SIPGRSGKSC RLRWCNQLSP  60
NVQHLPFTPH EDDVILRAHL IHGNKWSVIS KLLPGRTDNA IKNHWNSTLR RRGLTLTRSS  120
SESESTQSDD NDEGLKNKRR RCVSDVSSCD GMTVLTLLPP GDDGEKKKDG YEVEKGTGET  180
DDPCLVDVMR KMIAKEVRSY INELRAKDGL SFGPTSE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138168KRRRCVSDVSSCDGMTVLTLLPPGDDGEKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37260.17e-44MYB family protein