PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc047423.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 220aa    MW: 25594 Da    PI: 7.8952
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc047423.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015122145123
                            EEETTTTEEESSHHHHHHHHHH.T CS
                zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                            ++C++C+ksF+    L +H  + H
  Cse_sc047423.1_g010.1 122 WRCGYCKKSFRAEKFLDQHFHNrH 145
                            58**********999999976655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MRRVRIRACK WIIILISIQS FFLQLFFVNS QSSEEHAHEV HCSRERSRAA YKVIEESSEE  60
HAHEVHCSRE RSRAAYKVIE EYLTPFVEQE NYQMSAKCKL HPSNDIFRDQ EEHKIHVDVN  120
EWRCGYCKKS FRAEKFLDQH FHNRHYNLLN VSQSNCLADL CGALHCDYLA NSVVPKMKCN  180
PAAAARNRHL CESLADGCFP VHQGPSASRL HGNILYLYGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63280.15e-77C2H2 family protein