PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc047494.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 191aa MW: 21727.9 Da PI: 8.4741

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc047494.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.4e-20	82	176	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y +YA+e+GF +rks++k+ r+g ++k+ +vC++eg +++ + + +k+ rt++ tgCka+++ +++ + k+++t+++ Cse_sc047494.1_g010.1 82 MYMRYASEAGFGIRKSTQKRL-RDGFVKKKYLVCNREGCPKKIRLNtlapkkGDKQVRTSNFRITGCKARVVFHMMPgSRKYRLTTFD 168 8*************99998.9999**********998888899887788888999999*********9****** PP FAR1 83 leHnHela 90 eHnHel Cse_sc047494.1_g010.1 169 VEHNHELD 176 ****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 191 aa Download sequence
MEIFDLNEVP VGEDSIDLDV TISAVIFEVD DTSSGLKTPS SFIHHDFIDT PGGSVFWVPR 60 VAASVLPVLF SVYDSVEDCI SMYMRYASEA GFGIRKSTQK RLRDGFVKKK YLVCNREGCP 120 KKIRLNTLAP KKGDKQVRTS NFRITGCKAR VVFHMMPGSR KYRLTTFDVE HNHELDRVEY 180 KHLSKNCIDN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	7e-09	FAR1 family protein