PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc047581.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 185aa MW: 21207.4 Da PI: 10.1983

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc047581.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.5e-16	45	140	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tg ka++++++++ +gk+++ ++ Cse_sc047581.1_g010.1 45 EMYSTYAEAGGFQIKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGSKARIRLELDQvSGKYKLVQF 131 58*************99888.778899*******99877777889888899999999********************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc047581.1_g010.1 132 IAKHNHVLI 140 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MRSPRPTLYE HAETPGGSIY WEPHVEGICV PEEGKYYDTI EEAIEMYSTY AEAGGFQIKK 60 SGQRLTKSGM VQHKYIMCNK EGIPRRINID TLDPQNSDKQ KRNTTLHITG SKARIRLELD 120 QVSGKYKLVQ FIAKHNHVLI PKEYKHFTKK QRRMTQADKM FIVKAPTNKI GATRAHNFLT 180 SLKGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-09	FAR1 family protein