PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048121.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 165aa    MW: 18915.8 Da    PI: 6.9103
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048121.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH391.3e-12732126
                           --S---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                           +++++C f++rtG C yGd+C+F+H+
  Cse_sc048121.1_g020.1  7 PGEPNCIFYLRTGMCGYGDSCRFNHP 32
                           5799*********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MACPDRPGEP NCIFYLRTGM CGYGDSCRFN HPTHIDPVKI RTLFVNYTIR ANQHVGGELP  60
ERVGEPDCVK ISISLLPITY ISRNASVEAV VRFVQDDQKE QDIKGMELEV QALEELSKYL  120
FLKIYELRHA KVEAAEAQNR SKILQPMSRK EVRKMDDLTN LNMMV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04990.21e-17C3H family protein