PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc048369.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 190aa MW: 21975.3 Da PI: 9.7769

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc048369.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	135.1	4.7e-42	9	142	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksg 81 +pGfrF Pt+eelv++yLk+k+++++ ++++v++++++y++ P+dLp+ +++++ ++w+fF++r++k+a+g r++r t+sg Cse_sc048369.1_g020.1 9 TPGFRFYPTEEELVSFYLKHKMQSTNdrllKDIDRVMPQLQVYDFCPSDLPRyagaCCQGDPEQWFFFIPRQEKQAKGGRPSRLTNSG 96 79*******************9997887667778***********546766666888********************* PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 yWkatg+ v+s++++++g++kt+vfy+gr p+g+kt+W m+ey+ Cse_sc048369.1_g020.1 97 YWKATGSPSVVYSSSNRAIGIRKTMVFYNGRVPRGTKTKWKMNEYK 142 *******************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEGDGGVVTP GFRFYPTEEE LVSFYLKHKM QSTNDRLLKD IDRVMPQLQV YDFCPSDLPR 60 YAGACCQGDP EQWFFFIPRQ EKQAKGGRPS RLTNSGYWKA TGSPSVVYSS SNRAIGIRKT 120 MVFYNGRVPR GTKTKWKMNE YKALKEEPFA ITSLIPETNK MQLMEELSLC RVYLKSKCLR 180 AFDRRPPKDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	2e-71	NAC family protein