PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048581.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 188aa    MW: 21086.8 Da    PI: 6.5143
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048581.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.41.9e-143678347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++T+ Ed+ +++a+  +G++ W+ I++ ++ g t++ +k++w++ 
  Cse_sc048581.1_g010.1 36 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GHTDNAIKNHWNST 78
                           89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MMSSSANDDV NLLKKKGSWT PEEEAKLIHP NVQHRPFTPH EDDVILRAHL IHGNKWSVIS  60
KLLPGHTDNA IKNHWNSTLR RHGLTLTRSS ESELTQSVDD DDEGLTNKRR RCVSVSKVSS  120
CDGMTLLTLL PPGDGEKKKD GDEVEKGTVE INDTYLVDVM RKMIAKEVRT YIDELKAKDG  180
LSFGPTTE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50060.19e-21MYB family protein