PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048666.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 164aa    MW: 19071 Da    PI: 9.945
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048666.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK604.3e-19550752
                 RWP-RK  7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                            +++++yF+++i++AAk+L+++lTv  r  R +GI+RWPhRk+ks+
  Cse_sc048666.1_g020.1  5 RKVIAQYFDKTINAAAKKLNIGLTVFRRHYRYLGIQRWPHRKLKSI 50
                           589*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MAFRRKVIAQ YFDKTINAAA KKLNIGLTVF RRHYRYLGIQ RWPHRKLKSI QALIDSTEAE  60
NGGAQGDEYM QEILQTLKEE KKLIKEMPDL QLVQETKRWR QVNFKAKYEK MKVMALILSL  120
TNKTATNVGT QVQSQSLKND ASTNEIEDGY CKHCAEQEYL ISQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.14e-26Nin-like family protein