PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc048781.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 230aa    MW: 25277.6 Da    PI: 10.6225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc048781.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY77.91.1e-24157215259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             D y+W+KYG K++ gs +pr YY+C +  gCp++k+ve s +d k++++tY geH+h+
  Cse_sc048781.1_g020.1 157 ADDYSWKKYGEKKIDGSIYPRVYYKCNTGkGCPARKRVELSLDDSKMLVVTYDGEHRHH 215
                            69************************8776****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MAVDCVGQTV DHLHQMFQFS SGHDFNLSRA VKRTGHARFR RAPATFSDGP STSSSQSEDN  60
KPQKVTATAT ESPSTSSSSN GKSLGIVAPA PTFSSRKPPL PSTHRKRCNT DVNSVNRSGS  120
VSRSGCHCCK RRKMSSSSKR EIRRVPIIGS KITSIPADDY SWKKYGEKKI DGSIYPRVYY  180
KCNTGKGCPA RKRVELSLDD SKMLVVTYDG EHRHHHAPTP VPMRLTGVVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.11e-32WRKY family protein