PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049095.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 248aa    MW: 28079.6 Da    PI: 7.0854
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049095.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.91.1e-1020981594
                           -EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
                     B3 15 rlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                            l lp kf+++h g+k   k+  +++   g  W++k+  +k +++ y l +GW + vk+ gL  g+ ++F+++g+s f ++v
  Cse_sc049095.1_g010.1 20 HLPLPPKFVTKHLGDKIL-KDPLIKSaNGGYLWKLKM--KKIDDHsYCLVDGWCNVVKDVGLLFGELLLFRYVGSSVFLMHV 98
                           378*********555544.455666636779******..5555555****************************99994444 PP
2B331.82.6e-101141891790
                            E--HHH.HTT---..--SEEEEEETTS......-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  17 vlpkkfaeehggkkeesktltledesg......rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            ++p +f+++ g++++  +tltl+ ++g       +++ ++      +ry+l kGWk+F +  ++ egD +vFk++ ++++
  Cse_sc049095.1_g010.1 114 RMPADFVRSAGIDTK--RTLTLRGLDGfemaipVQFDTQY--GCLAKRYFLLKGWKDFMQGTNISEGDKCVFKFITSEDK 189
                            67999**99999954..59********6666555555555..5555669************************9875443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MVDQRPPSFF HILMNPSSPH LPLPPKFVTK HLGDKILKDP LIKSANGGYL WKLKMKKIDD  60
HSYCLVDGWC NVVKDVGLLF GELLLFRYVG SSVFLMHVYS VNGCEKILVP KIKRMPADFV  120
RSAGIDTKRT LTLRGLDGFE MAIPVQFDTQ YGCLAKRYFL LKGWKDFMQG TNISEGDKCV  180
FKFITSEDKL CLAKLTKPPP AAEAPATEVN GDDDKHENEN ENEDVEPVDD VDPFFVATIT  240
SQKFRLIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-08B3 family protein