PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc049095.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 256aa MW: 28909.3 Da PI: 4.294

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc049095.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31	4.4e-10	104	184	17	97
E--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 lpk+f++ + ++k +++++++g++ +++l+ k s ry ++ GW F ++n++ +gD +v+k+++++++ ++ k+ Cse_sc049095.1_g020.1 104 LLPKDFVALARIG--TKKNIIIKSLDGNETQMTLQSykLKWSTRYCFSVGWTAFKRSNNISDGDECVLKYIKSEDKMCLAKIT 184 6899998555433..34579999**99999995557788888*************************988887776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MKNLDGNESQ MAVLAATTRL DKQFNSTQYN LSLGWVAFKQ SNNISQGDEC VFKYITSEDK 60 MCLVKITKAS ATEVNDGMDV EDDNDTYEDE NVKLVDDADP FFALLPKDFV ALARIGTKKN 120 IIIKSLDGNE TQMTLQSYKL KWSTRYCFSV GWTAFKRSNN ISDGDECVLK YIKSEDKMCL 180 AKITKKTTRA TLLPAEVDND DMDDEDVNEE GKGEDAKLVE EDDYDYDRDD GDPSFILNIS 240 KANQYKLPIK SCFSKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31640.1	4e-06	B3 family protein