PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049100.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 147aa    MW: 17061.7 Da    PI: 10.226
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049100.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK56.55.3e-18450652
                 RWP-RK  6 sledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
                           s e++s+yF++p++ AAk  +v+ ++ K  CR  GI+ WP+Rk+ sl
  Cse_sc049100.1_g010.1  4 SREVISHYFHMPLHRAAKYFNVGSSLFKVHCRSVGIQCWPYRKLLSL 50
                           7899***************************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MSFSREVISH YFHMPLHRAA KYFNVGSSLF KVHCRSVGIQ CWPYRKLLSL EKLINYFQGK  60
DGDSNTNENM QEIITKLQEE KRRIKENPEL PITNNTKKLR RSYLQKKKHI NLELSLSLPI  120
VADVEPLQSS LMAATMKSNN SGKHIDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74480.11e-22Nin-like family protein