PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049240.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 187aa    MW: 20936.5 Da    PI: 6.2497
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049240.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.21.2e-153577347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                           ++T+ Ed+ +++a+  +G++ W+ I++ ++ gRt++ +k++w++ 
  Cse_sc049240.1_g010.1 35 PFTPHEDDVILRAHLIHGNK-WSVISKLLP-GRTDNAIKNHWNST 77
                           89******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MTSSSNDDVN LLKKKGSWTP EEDAKLIHPN VQHRPFTPHE DDVILRAHLI HGNKWSVISK  60
LLPGRTDNAI KNHWNSTLRR RGLTLTQSSE SESTQSDDND DESLGLKNKR RSCDGMTLLT  120
LLPPGDGEKK KGGDEVEKEI EDTCLVDVMK KMIAKEVRSY IDDLRANDGL SFGAFAPCGP  180
TERVTER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.12e-21MYB family protein