PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049385.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 280aa    MW: 32870.6 Da    PI: 8.1077
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049385.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B338.61.9e-1221981697
                           EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                     B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97
                           l lp +f +++  ++ +++ ++   + g +W++k+  +k ++ry +t+GW + vk+ +L+ gD++vF l+++s f  +v+++
  Cse_sc049385.1_g010.1 21 LPLPHDFYRRYLRNQMTKVPIVRSVKGGFKWRLKI--EKVGERYSFTDGWLNLVKDADLQFGDMLVFWLVDDSAF--KVTIY 98
                           7899*******55545555565555888*******..*********************************99999..55554 PP
2B3512.6e-161492271290
                            HTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEE..TTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                     B3  12 ksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkk..sgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                            +++ l+lpkkf+    g++  e+ t+++++++g++We+ ++ +k+  s+ry+l+ GW++F + n+L egD +vFk++ ++++
  Cse_sc049385.1_g010.1 149 THDVLRLPKKFV-GLpGIDR-EG-TIIMKNQDGKEWEMGVRLDKSywSERYTLSPGWRKFKRCNKLTEGDECVFKFITSESK 227
                            67889*******.5536664.43.9***************9966633677*************************9976554 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MAPRTYPSFF KIILDQTRPY LPLPHDFYRR YLRNQMTKVP IVRSVKGGFK WRLKIEKVGE  60
RYSFTDGWLN LVKDADLQFG DMLVFWLVDD SAFKVTIYTT NECEKVLPPR NKEVKLEDED  120
EDEDEDENDY HGHDVDPEDP CFLVIIAKTH DVLRLPKKFV GLPGIDREGT IIMKNQDGKE  180
WEMGVRLDKS YWSERYTLSP GWRKFKRCNK LTEGDECVFK FITSESKLCL AKVTKKKPDT  240
EAVKRTQEQR LGQHGGRVDV QSEDECVEVV KRGRGRPRKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1271279KRGRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.14e-18B3 family protein