PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc049489.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 255aa    MW: 28459.2 Da    PI: 9.8543
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc049489.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.38.4e-06213232525
                            --SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                            +C +fa+   C++Gd+CkF H
  Cse_sc049489.1_g010.1 213 PCFNFAK-EACQFGDSCKFVH 232
                            6778888.89*********** PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MIGSPQPPVI LLSNKLSTVT HHHLLTRVPN LCKGYEVLKY ILGSSDKASA ILSLPLRRNL  60
KWTPLIHKPP RKHGLLIAEI FNDNKRSPTI ALKVELRSLK LGDLSIDAYF RKIEFIATIL  120
TSLGSPVTND DVLTFSLEGL PDKYENICTI ITHREPFPDL KTARSMLTIE EMRLKSKSQA  180
LPVDSSSSSP MILFAESGTN CRSTIPQVNS SKPCFNFAKE ACQFGDSCKF VHTRQMHATP  240
QNPTQRALII VLQMP