PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc050078.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 162aa    MW: 17372.9 Da    PI: 9.896
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc050078.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.61.7e-183872135
                   GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                           C+ Cgt+kTplWR gp g+k+LCnaCG++ rk+++
  Cse_sc050078.1_g010.1 38 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKRRR 72
                           ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MGDVSDKGSE CEDMMMNSPE RCNGSVSSDG GDSLIKTCAD CGTSKTPLWR GGPAGPKSLC  60
NACGIRSRKR RRALLGVSTK DDKKPKKITV TTSGDSQSSG LTTASRSDYM GDLCLKKRIM  120
ALGTEVVLQR PRSRITKQRR KPSVEEQAAY LLMALSCGSN FG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16872RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.16e-34GATA family protein