PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc050538.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 237aa    MW: 27564.3 Da    PI: 8.6305
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc050538.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.22.7e-08591054790
                   FAR1  47 k...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                                +++++r+ +++rt+Cka ++v+   ++ +  +++++ HnH+l+
  Cse_sc050538.1_g010.1  59 CalkKKSNSRKVSSKRTDCKAVFRVRHIPRKGYWCYDFVEGHNHSLV 105
                            24545778889999***************999999**********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MAIVDAHQFN QVEGCKIWVP DIPVGQKPAY GMMYHSLEHA YQYYKDMSKE GTNPAPKACA  60
LKKKSNSRKV SSKRTDCKAV FRVRHIPRKG YWCYDFVEGH NHSLVSEEDS IFLVSSREVT  120
YTQQVFLYQA SQVNLGPVKG FNLLRQIYGD YDFIRASSVD CKNYRRDVLD FIGKNDAQML  180
VEMLMNKKDF IPNFSFEYQT GDNNVLTNLF WADEYAKRNY YAFGDVMSFD ATFRTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-20FAR1 family protein