PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc050662.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 601aa MW: 66897.9 Da PI: 10.323

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc050662.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.5e-09	24	58	2	37
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtl 37 ++W t E++ll+ av+++G+++W++Ia+++ Rt+ Cse_sc050662.1_g010.1 24 DAWGTSEELLLASAVNRYGTKNWDLIASEIK-IRTA 58 58***************************98.6665 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MAVDNTPSST AKSDHHHHHA PPPDAWGTSE ELLLASAVNR YGTKNWDLIA SEIKIRTASN 60 QIYFTPFHCQ QKYKELKRRF NDDNDDDVTD DVISIPWLDD LKKQRIVWLQ NHLQNLDPRI 120 SSLQLTVKKL KEEREKPAEK AEPVAVVSSG TGEDESDRSV NGSNGNVETN EPEKSPVRTG 180 EEKPVGSEPV KSEPGGNESE GDEDEEGGKN SDVQSSVRRD RVRRGSTVVV MKGVADEDQS 240 TDSIPVRSLP LVDFLHKVNK VGSTVFDRRL DRQEKVRYKN LIRQHIDYEI LQTRLKEGWY 300 SDGNDKFFRD LLLLVSNTRI FFPKESPESA AAVELRQLIL KEMMSKRKPK TDSKSEKQTS 360 LKSLNLPSKR ASEPADSLLL KPKLAGPIVV CRKRSSITAK AAGSSSGADR RKEPTDLKNP 420 DKLLEETPKR SRDSFPMITK KKGKNIEKSQ EKTPTNETTS DTKTDKKKKL TEAEEKKQSA 480 AKFLNRMKRS NNESLLDSLK SSSDRGGNSE NNSKGGGEQK RGGGSSNKAG NSEAKKEHAS 540 KKSSSGRQGK EQGSPAKRSV GRPPKRGAAP SPMAAVLGKR NRESTDSETL VTKQTKKRSK 600 R

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MAVDNTPSST AKSDHHHHHA PPPDAWGTSE ELLLASAVNR YGTKNWDLIA SEIKIRTASN  60
QIYFTPFHCQ QKYKELKRRF NDDNDDDVTD DVISIPWLDD LKKQRIVWLQ NHLQNLDPRI  120
SSLQLTVKKL KEEREKPAEK AEPVAVVSSG TGEDESDRSV NGSNGNVETN EPEKSPVRTG  180
EEKPVGSEPV KSEPGGNESE GDEDEEGGKN SDVQSSVRRD RVRRGSTVVV MKGVADEDQS  240
TDSIPVRSLP LVDFLHKVNK VGSTVFDRRL DRQEKVRYKN LIRQHIDYEI LQTRLKEGWY  300
SDGNDKFFRD LLLLVSNTRI FFPKESPESA AAVELRQLIL KEMMSKRKPK TDSKSEKQTS  360
LKSLNLPSKR ASEPADSLLL KPKLAGPIVV CRKRSSITAK AAGSSSGADR RKEPTDLKNP  420
DKLLEETPKR SRDSFPMITK KKGKNIEKSQ EKTPTNETTS DTKTDKKKKL TEAEEKKQSA  480
AKFLNRMKRS NNESLLDSLK SSSDRGGNSE NNSKGGGEQK RGGGSSNKAG NSEAKKEHAS  540
KKSSSGRQGK EQGSPAKRSV GRPPKRGAAP SPMAAVLGKR NRESTDSETL VTKQTKKRSK  600
R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	426	431	ETPKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44430.1	1e-40	MYB_related family protein