PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc050688.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 137aa    MW: 15527.5 Da    PI: 10.3223
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc050688.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.12.1e-1159114156
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtra 56 
                            kfY+eYA+e+GF+vr+  ++++k++++   + f+Cs+eg++ + k++ +k+ ++++
  Cse_sc050688.1_g010.1  59 KFYKEYARECGFQVRRGGQSNRKKKQNPDLKYFCCSREGTKPSPKSDISKKDKSKT 114
                            6****************9999999999*************9999988333333332 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
EPSTPRSTNI VQDNVVDVES VTQAGSYQPT PPGSKFWIPE AKNKPVEGTQ FDTIEQALKF  60
YKEYARECGF QVRRGGQSNR KKKQNPDLKY FCCSREGTKP SPKSDISKKD KSKTDTPSSD  120
ITEVVKVIKR RKRASQR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
180111RKKKQNPDLKYFCCSREGTKPSPKSDISKKDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.11e-06FAR1 family protein