PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc050932.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 229aa    MW: 25805.1 Da    PI: 9.5247
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc050932.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA97.12e-30129184258
              CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                             ++YVNaKQy++Il+RRq Rakle+++kl  k+rkpylheSRhkhA+   RgsgGrF
  Cse_sc050932.1_g020.1 129 GTIYVNAKQYNGILRRRQIRAKLEAQNKL-VKNRKPYLHESRHKHAMSTVRGSGGRF 184
                            689**************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MQMVVAHGGR SAERVVFGDD VTDGGVDDLE KITKVVYCFF KYNQDSSTGH SSDQSNKDDD  60
ILHSWSILKI NESYKRLEEA QIKPILFMSN PSFGMTDQQL EKNMPIIQPH MVHIAPARVP  120
MPLDLSEDGT IYVNAKQYNG ILRRRQIRAK LEAQNKLVKN RKPYLHESRH KHAMSTVRGS  180
GGRFLPSNKQ HQSKPASRFL SSHCSSASYP SGSDHVMFSQ TDHGFSSIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.16e-33NF-YA family protein