PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc051025.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 435aa MW: 48686 Da PI: 6.0846

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc051025.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.9	9.8e-50	50	175	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 pGfrF+Ptd+el+++yLkkk++g++ + ++i+evd +++ePwdLp ++ ++e+ew+fFs+r kky++g++++rat+sgyWkatgk Cse_sc051025.1_g010.1 50 FPGFRFSPTDDELISYYLKKKLQGNDSCV-DIIPEVDFCRHEPWDLPaLSIIQSENEWFFFSTRGKKYPNGSQSKRATQSGYWKATGK 136 69**********************777.99***********657777899**************************** PP NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++v++ +g ++g+k+tLvf++grap+ge+t+W+mhey + Cse_sc051025.1_g010.1 137 ERNVKA-GGVAIGTKRTLVFHTGRAPRGERTEWIMHEYCM 175 *9.*****************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MSTNQQSDWG MMDGSDGHHD GGADDGFARR NDVEKMREMQ LSIAASSSVF PGFRFSPTDD 60 ELISYYLKKK LQGNDSCVDI IPEVDFCRHE PWDLPALSII QSENEWFFFS TRGKKYPNGS 120 QSKRATQSGY WKATGKERNV KAGGVAIGTK RTLVFHTGRA PRGERTEWIM HEYCMSDTSQ 180 ESLVVCRLKR NGDFRLTESS KSSNDLRNLS TTDNDHYSAA NENANTQRGG SDEGNPIKSC 240 SKDSTSSYMS HSVEQIHSVE QIESESDSDR QLIRHESTHG SSSLYKDCEN EDDCFADIIN 300 DDIITLDESA SHSLTFHGVP IGSTCMQPQE SISAQGTAVR RIKLRQKGQN HEKQSSDGVQ 360 NQPPDQKPGC VVSAMAGDAN TVSMFHPTHL VLVLLLLLIM YVLWQCAYSK QPTGISMEVP 420 KRQLRYWLHK AADYI

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MSTNQQSDWG MMDGSDGHHD GGADDGFARR NDVEKMREMQ LSIAASSSVF PGFRFSPTDD  60
ELISYYLKKK LQGNDSCVDI IPEVDFCRHE PWDLPALSII QSENEWFFFS TRGKKYPNGS  120
QSKRATQSGY WKATGKERNV KAGGVAIGTK RTLVFHTGRA PRGERTEWIM HEYCMSDTSQ  180
ESLVVCRLKR NGDFRLTESS KSSNDLRNLS TTDNDHYSAA NENANTQRGG SDEGNPIKSC  240
SKDSTSSYMS HSVEQIHSVE QIESESDSDR QLIRHESTHG SSSLYKDCEN EDDCFADIIN  300
DDIITLDESA SHSLTFHGVP IGSTCMQPQE SISAQGTAVR RIKLRQKGQN HEKQSSDGVQ  360
NQPPDQKPGC VVSAMAGDAN TVSMFHPTHL VLVLLLLLIM YVLWQCAYSK QPTGISMEVP  420
KRQLRYWLHK AADYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27300.1	3e-85	NAC family protein