PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc051235.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 578aa MW: 65309.6 Da PI: 6.6579

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc051235.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.8	4.8e-15	143	224	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++Y+k+ GF+++ ++++ + ++ + f C++ gk++++ k+ ++ +tgC a+l+v+k + +ev+ +++eHnH+ Cse_sc051235.1_g010.1 143 NFYRHYSKMGGFDIKLGTESNPDGSDCPSIKYFSCNRGGKKRDSMKN--------TSCKTGCLAQLRVRKVDGVMYEVYVFVEEHNHP 222 6*****************99999999999*****9998777........999**************************** PP FAR1 89 la 90 l+ Cse_sc051235.1_g010.1 223 LV 224 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MQCEESMTTS FRAKYYTKNA RTIFNCVCEI QYVTGLNAKF YFFGGLGTIS SSNNVGESNS 60 CNYVCGGSSS LGSDGVRVSS SGSVSDDSSS RLVSASSSSS VVNVSNVGDR STGVFRRVWV 120 PDVDVSLKPT KGTVFVSLVQ AYNFYRHYSK MGGFDIKLGT ESNPDGSDCP SIKYFSCNRG 180 GKKRDSMKNT SCKTGCLAQL RVRKVDGVMY EVYVFVEEHN HPLVSKEDMQ FLMSSRDMGC 240 SRQHFLMQVS NSNVGPVRAF RLMKEVYGGF ENIGATVNFK RDVSTFIGDR DAQMVVEKLE 300 NLEKHCEGEG DSLSALFLAD SCAKMNYRRF GDAFLTELQV VVTDQDPSMK QAIADVFPNA 360 CHRLYMWHIM QILSVKVGSS VCNNTDFRKR LCAVVWNDQI SPSIFEEEWK SIIDEFGMSE 420 NKWLSDIYDM RSRWIPAFLR DEDLSGLIRT TSRSKSENHF FGRWPNAYLT LVEFTSHFDS 480 AMDSQRYSQR KNDHESRYKK PELRTGLKLE KDAAEIYTLN VFFDIQEEIS ASVTNCLSVS 540 TQEIGLFEKY FIRDTGVKKW NDKASFEVFE DCTILIVS

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MQCEESMTTS FRAKYYTKNA RTIFNCVCEI QYVTGLNAKF YFFGGLGTIS SSNNVGESNS  60
CNYVCGGSSS LGSDGVRVSS SGSVSDDSSS RLVSASSSSS VVNVSNVGDR STGVFRRVWV  120
PDVDVSLKPT KGTVFVSLVQ AYNFYRHYSK MGGFDIKLGT ESNPDGSDCP SIKYFSCNRG  180
GKKRDSMKNT SCKTGCLAQL RVRKVDGVMY EVYVFVEEHN HPLVSKEDMQ FLMSSRDMGC  240
SRQHFLMQVS NSNVGPVRAF RLMKEVYGGF ENIGATVNFK RDVSTFIGDR DAQMVVEKLE  300
NLEKHCEGEG DSLSALFLAD SCAKMNYRRF GDAFLTELQV VVTDQDPSMK QAIADVFPNA  360
CHRLYMWHIM QILSVKVGSS VCNNTDFRKR LCAVVWNDQI SPSIFEEEWK SIIDEFGMSE  420
NKWLSDIYDM RSRWIPAFLR DEDLSGLIRT TSRSKSENHF FGRWPNAYLT LVEFTSHFDS  480
AMDSQRYSQR KNDHESRYKK PELRTGLKLE KDAAEIYTLN VFFDIQEEIS ASVTNCLSVS  540
TQEIGLFEKY FIRDTGVKKW NDKASFEVFE DCTILIVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-35	FAR1 family protein