PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc051294.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 190aa MW: 21500.7 Da PI: 10.1101

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc051294.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.8e-12	29	72	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++P + K++ +iL ++eY+k+L Cse_sc051294.1_g010.1 29 LMAERRRRKRLNDRLSMLRSIVPRiS------KMDRTSILGDTIEYMKDL 72 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MISTTPNVFN IGEKKSKSKN VQGQPSKNLM AERRRRKRLN DRLSMLRSIV PRISKMDRTS 60 ILGDTIEYMK DLMEKIRSLK EQDTGLDSSS LNELKVNQTQ ERNSPKFEVE RRNIDTRIQI 120 CCAPKPGLLF SNVNTIESLG LDIRQCVISS FGDFTLHASC YEAQGNQVLA SSEEIKQILF 180 KNAGYGGRGL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	39	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	4e-72	bHLH family protein