PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc052480.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 142aa    MW: 16236.1 Da    PI: 9.6289
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc052480.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY36.97.2e-12108130123
                            ---SS-EEEEEEE--TT-SS-EE CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                            l+Dgy+WrKYGqK vkg+ +pr+
  Cse_sc052480.1_g010.1 108 LNDGYKWRKYGQKAVKGNSNPRQ 130
                            58*******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
RGVDGLVTEI IYKGKHNHQP PRTVGNFNDT EPFNDQTSYF NYSRENSSIK KDQESSHEML  60
GSWDNDDVAK HQVKKRNIEV KGCDPVSSHR TLPDSRIIVQ ATSKIDLLND GYKWRKYGQK  120
AVKGNSNPRQ VSPLFKFTID SL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.19e-33WRKY family protein