PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc052644.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 184aa    MW: 21076.8 Da    PI: 10.5371
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc052644.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.000116284123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           ++C +C + F+++  L  H++ H
  Cse_sc052644.1_g010.1 62 FECLYCRRNFPTSQALGGHQNAH 84
                           89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MNAKTISQLA ILPPKENSIR LFGKELCGNE SASIITMDST SPHTATINND ETKEKVKNRR  60
MFECLYCRRN FPTSQALGGH QNAHRKERSH AKRAHQQRTT TKSPPYPHYS SPSNIFNWNN  120
STRFNGGKAP YIFHPTLNNG RPLTPWRHPT VVQNMTISDL GIRSFYMHES KQSFKDQVSL  180
DLHL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41940.19e-27C2H2 family protein