PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc053127.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 222aa    MW: 25725.1 Da    PI: 4.9393
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc053127.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-145598755
                           HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH  7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                             Er+RR+++N++++ Lr ++P+ +      K++Ka+i + A++YI++L+
  Cse_sc053127.1_g010.1 55 VSERNRRKKLNDRLFALRAVVPNiS------KMDKASIIKDAIDYIQHLH 98
                           57*********************66......*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MEDIGDDYKH YWETNMFLQN EEFDSWGGIE ETFSGYYDSS SPDGPQSSAA SKNIVSERNR  60
RKKLNDRLFA LRAVVPNISK MDKASIIKDA IDYIQHLHDQ ERVIQTEITE LESQKLESGV  120
LEYDQEMMFM STEKSKKKKV EQSYDSSESR TYPVEILELK VSYVGEKTVL VSLKCRKRRD  180
TMVKICEVFE TLKLNVVTAN VTAFSDTLFK TLFIQVPSFN FT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1173179LKCRKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.34e-80bHLH family protein