PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc053969.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C2H2
Protein Properties Length: 289aa    MW: 32718.4 Da    PI: 8.405
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc053969.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2140.000155274123
                           EEETTTTEEESSHHHHHHHHHHT CS
                zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                           y+C+ C + F++   L  H+++H
  Cse_sc053969.1_g010.1 52 YTCSFCRREFRSAQALGGHMNVH 74
                           9********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MDQSRYWIQK GGTCLNSHGL SSFGESWEEQ AFAEDLDAAG PLGGCIWPPR SYTCSFCRRE  60
FRSAQALGGH MNVHRRDRAR LKQVSSPNNN SRILEEPNTS LGKCVLQNPN EICSPNFDLD  120
HHPLFSSSSG PSPSTFPVNS RPFTVHSVNQ EQQKCTSILS WSKFESRKRF QIDDLGRRQD  180
NSFTKVLLES NISTNSKKIN DHQQIEVNFT GGNLNPNNKR KCETPIFKYK DDAAGDSGLI  240
FKRRRIDHDQ AQSIFPKDGD ASESRLPLKR SPNSTLEYLD LELRLGDRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1242246KRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.15e-27C2H2 family protein