PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc054309.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 249aa    MW: 27904 Da    PI: 7.5027
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc054309.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.93.8e-1381128355
                            HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            ++h+e+ErrRR+riN  +++Lr l+P +      K++Ka+ L ++++ Ik+L+
  Cse_sc054309.1_g010.1  81 KSHSEAERRRRERINAHLDTLRGLVPCN-----DKMDKATLLAEVIRQIKQLK 128
                            58*************************8.....7*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MEFYGWTNPG FSNLGPNGFD GSLMNSSAFN EDYGNVDGLF MKSCESLVLD NEKSELVKGQ  60
SKVLGKKTVS ISDEKAVAAL KSHSEAERRR RERINAHLDT LRGLVPCNDK MDKATLLAEV  120
IRQIKQLKVN ATQASTGLLM PEDVDEVKIE KLDQLTVNGS LIFHASFCCK HRPELLTDVR  180
KALVDLKVHM ERAQLSYLGD HVKIIFDFTA NEDLVTSVRE ALTAVIEKGS ISPEYSLRTL  240
PNKRRRYCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18792ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.15e-27bHLH family protein