PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc054986.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 169aa    MW: 19846.6 Da    PI: 10.1861
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc054986.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding391.9e-12553248
                           SSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  2 grWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48
                           g W++eEd++lv+++  + ++ +W+++++    + R +k+c++rw++yl
  Cse_sc054986.1_g020.1  5 GLWSPEEDKKLVNYIITYDPHgCWSSVPNLASrLQRYRKSCRLRWNNYL 53
                           56*****************99***************************7 PP
2Myb_DNA-binding24.75.6e-0871961946
                           TTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqk 46
                           l ++ W+ Ia++++ gRt+ ++k++w++
  Cse_sc054986.1_g020.1 71 LRNK-WAQIASYLP-GRTDSDVKNFWNS 96
                           5677.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MVKSGLWSPE EDKKLVNYII TYDPHGCWSS VPNLASRLQR YRKSCRLRWN NYLRPGLKRG  60
SFSLQESTLM LRNKWAQIAS YLPGRTDSDV KNFWNSNTKK KLLQFQLQMI NDQERRVDQE  120
TENEVDHPPL PPSFMRLQAR SKSDNMNLIT HSQPNILMTY SLYPGRGPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13890.29e-44MYB family protein