PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc056979.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 188aa MW: 21996.4 Da PI: 4.561

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc056979.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	120.1	2e-37	9	128	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrF+Ptdeelvv++L++k++ + + ++i+++d+y ++PwdL+ k+ e k+wy+Fs+r+ +nr+t++gyW++ g Cse_sc056979.1_g010.1 9 LPPGFRFRPTDEELVVHFLQRKASLLPYHP-DIIPDLDLYPHDPWDLDGKALVEGKKWYYFSRRS--------QNRVTANGYWQSCGG 87 79***********************998.89**********977778899**985........589******** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 d++++s+ +++++g+kk vf+ g+ap+g ktdW+m+e+r+ Cse_sc056979.1_g010.1 88 DEQIMSSnGNKKIGVKKYYVFHIGEAPEGIKTDWIMQEFRF 128 *9967788*************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MGDNKNVNLP PGFRFRPTDE ELVVHFLQRK ASLLPYHPDI IPDLDLYPHD PWDLDGKALV 60 EGKKWYYFSR RSQNRVTANG YWQSCGGDEQ IMSSNGNKKI GVKKYYVFHI GEAPEGIKTD 120 WIMQEFRFCD GANSSRSRRR DNSKIDWVIC RVYEQNYDND DDEDGMELSC LDEVFMSLDD 180 YDDISFPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	1e-68	NAC family protein