PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc056991.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 245aa MW: 28162.7 Da PI: 10.3097

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc056991.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45	2.4e-14	118	163	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++E++l+++++++lG++ W++Ia +++ gR ++++k++w+++l Cse_sc056991.1_g010.1 118 RGHISADEEDLIIRLHRLLGNR-WSLIAGRIP-GRADNEIKNYWNTHL 163 667799**************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MFYWQMMTRK VDELISELSK CMSYSQTRVF DVYSGSDITC QLVGLCRLHA EVPIAAVSSY 60 TNKRHYDSGK KGVVATSVHL RSGSPLASEL AWHPVVLKLD DWSCRLRWMN YLRPSVKRGH 120 ISADEEDLII RLHRLLGNRW SLIAGRIPGR ADNEIKNYWN THLSKKLTSQ GIDSKTHKPL 180 SSPPSLNPNH NLNHSFLHWI KPKQFQQIPM KTSQTSTPST RTVVLHLMIF LVTRLMMVSL 240 CSWIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	9e-42	MYB family protein