PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc058548.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 244aa    MW: 27966.2 Da    PI: 9.3781
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc058548.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR165.81.2e-2044139190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                            ++Yn+YA+e+GF+v+ks++k+ k++g ++++ ++C++eg +++ + +      ++k+ r++ +  tgC a++ ++++  +g++++tk+
  Cse_sc058548.1_g010.1  44 EMYNKYAEEAGFEVKKSAQKN-KKSGLVKSKYLMCNREGVPKDININtldlksSDKQVRNTRQRVTGCMARIFITLDPiSGEYKITKF 130
                            58************9998665.58999**************998888899998888889999999*********************** PP

                   FAR1  82 eleHnHela 90 
                            + +HnH + 
  Cse_sc058548.1_g010.1 131 VAKHNHLMI 139
                            ******875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
MTPRPTLYAH EETPGGSVYW EPVVDHIYLP VEGKKFKTID ECIEMYNKYA EEAGFEVKKS  60
AQKNKKSGLV KSKYLMCNRE GVPKDININT LDLKSSDKQV RNTRQRVTGC MARIFITLDP  120
ISGEYKITKF VAKHNHLMIP KELGATKAHN LLCSMKGGSQ YVHGTSSDFK NHQRDINICI  180
GESDAQMLIN KMENQKKYVP NFTFHYKVKK SELVAMFWAD EVAKCNYKEF GDIVSFDATF  240
RTNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-18FAR1 family protein