PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc058855.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 123aa    MW: 13950 Da    PI: 4.5519
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc058855.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC106.22e-3317130102
                  NF-YC  30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdelk 102
                            +kad+dv+misaea +++ +ace+fileltlrsw+h+ee  rrtl+++di+ a+trt+ifdflvdivpr+++k
  Cse_sc058855.1_g010.1   1 MKADKDVRMISAEAAIVFERACEMFILELTLRSWNHTEE--RRTLQRNDIDVAITRTEIFDFLVDIVPRKDIK 71 
                            9************************************97..99**************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MKADKDVRMI SAEAAIVFER ACEMFILELT LRSWNHTEER RTLQRNDIDV AITRTEIFDF  60
LVDIVPRKDI KEVMTSMPTS GSPGMISNKP LMDPGLYTQQ DPPSMGPAMW PQPPQQPQSP  120
SDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046RRTLQRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.37e-41NF-YC family protein