PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc060488.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 217aa    MW: 24812.1 Da    PI: 10.1009
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc060488.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind1087.1e-34321222101
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            Fl+k+++++ d+el+++isws++g sf+v+d+  fa+ vLp+ Fkh+nf+SFvRQLn+YgF+k+++++         weF+ ++F  g
  Cse_sc060488.1_g010.1  32 FLSKTFDLVTDPELDQIISWSKTGASFIVWDPVAFARMVLPRNFKHNNFSSFVRQLNTYGFRKIHTDR---------WEFAGENFLLG 110
                            9****************************************************************999.........*********** PP

                            XXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkk 101
                            kk+ll++ik+++
  Cse_sc060488.1_g010.1 111 KKHLLKNIKKRR 122
                            *********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
LSTEDDTAVE LGPDEDVPRP LDCLHGTLVP PFLSKTFDLV TDPELDQIIS WSKTGASFIV  60
WDPVAFARMV LPRNFKHNNF SSFVRQLNTY GFRKIHTDRW EFAGENFLLG KKHLLKNIKK  120
RRPTGSNATT NEVGTTPSIE AEVEQIQKER IKMKQEVMTL KQQQRGTNQY LESVNEMLQA  180
AEDRQKQMVT SLAKVFQSPR FKKGKGLISS PRNTRXT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1111121KKHLLKNIKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.15e-79HSF family protein