PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc063047.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 191aa    MW: 22485.7 Da    PI: 9.682
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc063047.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.16.2e-182367348
                    NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                           pGfrFhPtdeelv +yL++kv++k+l++ + ik++diyk++PwdLp
  Cse_sc063047.1_g010.1 23 PGFRFHPTDEELVGFYLRRKVDKKPLNF-DLIKQIDIYKYDPWDLP 67
                           9*************************99.99**************9 PP
2NAM116.23.2e-367116832128
                    NAM  32 evikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgek 118
                            + ik++diyk++PwdLpk+ + +++e yfF+kr +ky+++ r+nr+t+sg+Wkatg d++v+s+ ++  +glkk+Lv+y+g+a kg+k
  Cse_sc063047.1_g010.1  71 DLIKQIDIYKYDPWDLPKTSDMRDNERYFFCKRGRKYRNSIRPNRVTDSGFWKATGIDRPVYSStGSVCIGLKKSLVYYRGSAGKGTK 158
                            679**************98888999**************************************955666******************* PP

                    NAM 119 tdWvmheyrl 128
                            t+W+mhe+rl
  Cse_sc063047.1_g010.1 159 TEWMMHEFRL 168
                            ********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MDTGKMKVIS KRQVDEDENI PLPGFRFHPT DEELVGFYLR RKVDKKPLNF DLIKQIDIYK  60
YDPWDLPINF DLIKQIDIYK YDPWDLPKTS DMRDNERYFF CKRGRKYRNS IRPNRVTDSG  120
FWKATGIDRP VYSSTGSVCI GLKKSLVYYR GSAGKGTKTE WMMHEFRLPP SSPKNINHMD  180
DKSISQEAVS N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-69NAC family protein