PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc063239.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 259aa MW: 29265 Da PI: 8.7872

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc063239.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.1	1.7e-19	122	236	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........................tekerrtraetrtgC 62 +fY +Y+k+ GF+ r+ ++k k t + f+Cs++g +e++ k ++k+ r+r++ r+gC Cse_sc063239.1_g010.1 122 NFYVAYGKKGGFDCRRGGQYKAKGFSDATLKYFYCSRQGLNEDSYGKsgdsvtdndisgqseisddshrfgdvKKKQTRKRTSFRCGC 209 6****************************************99999*******************99899999999** PP FAR1 63 kaklkvkkekdgkwevtkleleHnHela 90 a+l+++k+ + +evtk+e HnH+l+ Cse_sc063239.1_g010.1 210 SASLTINKK-GNIYEVTKFEDGHNHPLV 236 ****9.9*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 259 aa Download sequence
DYSLIAPLRF YHLPQFVAPP RFAASPHFET LPLTHFATLS DLAAPPHFQP PPHSLDLPHL 60 HLLPPLPHQV HKSHPSRSLG DAAKDHVGFY VCGKDGSRTW YPDCLEKPIE GCQFISIDQA 120 YNFYVAYGKK GGFDCRRGGQ YKAKGFSDAT LKYFYCSRQG LNEDSYGKSG DSVTDNDISG 180 QSEISDDSHR FGDVKKKQTR KRTSFRCGCS ASLTINKKGN IYEVTKFEDG HNHPLVAEKD 240 MIFLKNSRKM GYTKQHFLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	1e-06	FAR1 family protein