PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc064420.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 256aa    MW: 29330.4 Da    PI: 4.6839
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc064420.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding476.1e-151461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W+++Ed +l  +v+++G  +W++ ++  g+ R++k+c++rw +yl
  Cse_sc064420.1_g010.1 14 KGAWSEDEDNKLRAYVQRYGHWNWRLLPKFAGLSRSGKSCRLRWVNYL 61
                           79******************99************************97 PP
2Myb_DNA-binding50.35.7e-1668112248
                            SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            g++T+eE++ +++++k+ G++ W+  a++++ gR+++++k+rw+++l
  Cse_sc064420.1_g010.1  68 GNFTKEEEDVIIELHKKIGNK-WSEMAAYLP-GRSDNEIKNRWHTHL 112
                            89*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MVKTPIFDKN GVKKGAWSED EDNKLRAYVQ RYGHWNWRLL PKFAGLSRSG KSCRLRWVNY  60
LRPDIKHGNF TKEEEDVIIE LHKKIGNKWS EMAAYLPGRS DNEIKNRWHT HLKKRAQKDQ  120
PVLEDEHIGT IEPDHANTTN NLVQNSDIEL QQDFEALLAE STLSSSGTNL SSCWFNGFDS  180
AGSSDDMPQL ADYTPIDNFW TETFLANNDG NISSSDSLFS SSDLVIPDSC NDKIMPDELL  240
WSSIDSYHDY GDEFFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.14e-53MYB family protein