PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc065590.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 245aa    MW: 27162.8 Da    PI: 9.8527
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc065590.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-1896144355
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ++GVr+++ +g+WvAeIr p++   r+r++lg+f taeeAa a++ a+  l+g
  Cse_sc065590.1_g010.1  96 FRGVRQRH-WGKWVAEIRLPKN---RTRVWLGTFHTAEEAAFAYDTAAYMLRG 144
                            8******9.**********965...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
QPTKESQTYS IFDAPKAADG PTDGSSRQSV GSLAQVPTNL TKQQVTDWLK FQQTSPSNIV  60
DHHWLGTQAQ PRKYTGRQAV NTTFVRNQIC SPRKIFRGVR QRHWGKWVAE IRLPKNRTRV  120
WLGTFHTAEE AAFAYDTAAY MLRGDNAHLN FPHMKNKLKA NSTNGNILAL LEAKMQTVSK  180
EVANTKAKDL VPPLVDVKLS ETATIEGGLE VNAVIGPDIG EGVQLSRMPS LDMDLIWDAL  240
LVSDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-43ERF family protein