PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc065697.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 214aa    MW: 24647.6 Da    PI: 4.8714
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc065697.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.69.1e-08160206455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            a n + r RR++i ++ +eL +l+P       +K++ ae+ + A +Y+k Lq
  Cse_sc065697.1_g010.1 160 AQNLAARARRRKISEKTQELGKLIPGG-----QKMNTAEMFQAAFKYVKFLQ 206
                            679999*******************86.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MALSFYTNWY NDDSSVTSLL WPPELHCFHE DSTFYDTRIN PIFDPNYTNN LDFPGLFSSW  60
YSVEPSSNLF KQELQDPYYH TFPYSNTFQH GNLLPEYAMG PELPSLLPPF PNSLTHQGSG  120
VDTLPPWYDC GLQEHAQVEE VSNMKVKKQD ASNEERSLSA QNLAARARRR KISEKTQELG  180
KLIPGGQKMN TAEMFQAAFK YVKFLQAQCW IDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.12e-19bHLH family protein