PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc067563.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 209aa    MW: 23193.8 Da    PI: 7.8388
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc067563.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA63.91.8e-2089123135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C+nC tt+TplWR+gp+g+k+LCnaCG++++k+++
  Cse_sc067563.1_g010.1  89 CANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 123
                            ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MYRCGSGSNN AMMFSMPYDE SPTSSAVDCT LSLGTPATRD YERVLERRPS ANWSANLCWD  60
ILHNSATVSP SHKVNHGGVV PDNLLARRCA NCDTTSTPLW RNGPRGPKSL CNACGIRFKK  120
EERRATAAAT GGADTAETHQ HYHHQPMING NPWVTNHTQT TTHKLQASYY SPAANEFKFI  180
DDVDDIDSPF LSWRLNVTDR PGLVHGFTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50870.14e-43GATA family protein