PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc068923.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 332aa    MW: 37464.8 Da    PI: 6.9484
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc068923.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.32.2e-18221255135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C +C t kTp+WR+gp g+ktLCnaCG++y++ +l
  Cse_sc068923.1_g010.1 221 CLHCATDKTPQWRSGPMGPKTLCNACGVRYKSGRL 255
                            99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MENNANKIFT TSSPANHDKP KTEQFVIEDL LDFPTDEAAV DVPFVASTES SPALETCNSP  60
LPGDVPHRTL PDPQFSNDLC VPYDDLAELE WLSNVVEESF SCEDLQKLQL ISGIKARPNY  120
ASSENQEFHP DPDNRANNPI FNTDMSVPGK ARTKRSRAAP CNWSFRLLVV SPTNTGPSVT  180
MSSESESDIT SSSTGRKTMK TLSKKKEVYE NSSHNGDGRK CLHCATDKTP QWRSGPMGPK  240
TLCNACGVRY KSGRLVPEYR PASSPTFVLA KHSNSHRKVL ELRRQKEMQR VQHHHHQQHQ  300
QYIHHQSMMF DVPNNDDYLI HQHIGPDYRQ LI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-92GATA family protein