PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc069621.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family Nin-like
Protein Properties Length: 157aa    MW: 18114.6 Da    PI: 8.7662
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc069621.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK53.16.3e-17548750
                 RWP-RK  7 ledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
                            +++s+yF+++i++A keL+v+l++LK  CR  GIkRW + k+k
  Cse_sc069621.1_g010.1  5 KDTISQYFHMTIRQAEKELNVGLSTLKYNCRDVGIKRWLYGKLK 48
                           578***********************************888887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MAYSKDTISQ YFHMTIRQAE KELNVGLSTL KYNCRDVGIK RWLYGKLKIL KTLIDNFQAE  60
NGGTQPENDR QEIIKMLKEG KKQLEDNPYL QLARTTKMLK ACNFKSKYQK RKNMSLVLSL  120
SNQTATNDIP LQCLSPTNNS DHEEMDDAYG SDSDKHD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66990.12e-21Nin-like family protein