PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc070541.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MIKC_MADS

Protein Properties

Length: 175aa MW: 19788.5 Da PI: 7.3903

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc070541.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	78.2	6e-25	9	57	1	49
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 k ie+ks rqvtfskRr+g++KKA LSvLCd+++avi+fs gklye Cse_sc070541.1_g010.1 9 KLIEDKSSRQVTFSKRRTGLMKKARHLSVLCDVDIAVIVFSALGKLYES 57 569********************************************95 PP
2	K-box	17.5	1.7e-07	106	161	29	84
K-box 29 enLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 e Lq+ R + ++ e Ls+ ++ +Le +L+ +l + R +K l l +++++++ Cse_sc070541.1_g010.1 106 ELLQTVDRLVEENNSEGLSVTDMTELELELDAALVQTRLRKRTLTLIDVDTMRRRV 161 55665555555566688************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGRKKLEMKL IEDKSSRQVT FSKRRTGLMK KARHLSVLCD VDIAVIVFSA LGKLYESCSG 60 SSSNSVEHML SRYERSITEE GERTNNGAGG QLEVLSQCTK FRTCKELLQT VDRLVEENNS 120 EGLSVTDMTE LELELDAALV QTRLRKRTLT LIDVDTMRRR VGIERNDMHA SDTSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.1	1e-31	MIKC_MADS family protein